Mass Spectroscopy Articles

Influence of Na+ and K+ Concentration in solvents on Mass Spectra of Peptides in LC–ESI-MS

The effect of dispersing a solvent into charged droplets, when applying a high electric potential to an effluent capillary, was first described by Zeleny in 1917 (1). It was investigated in more detail in 1955 by Drozin (2) and used in pioneering work for an electrospray interface by Dole et al (3,4). This was continued in 1984 by Yamashita and Fenn (5,6), which finally resulted in a description of an LC–MS interface in 1985 (7). Today electrospray ionization (ESI) is the most widely used ionization technique in LC–MS. This is especially true in protein mass spectrometry, where series of multiply charged ions are observed and used to determine the molecular mass (8,9). Furthermore, after tryptic digestion, the resulting peptides can be measured with LC–ESI-MS, to obtain amino acid sequence information after a second MS/MS-step (10–14).

Journal: 
Spectroscopy, Feb 1, 2006 .

ICP-MS Speciation Analysis: Three Roles of Selenium

For decades, selenium has been considered an essential element to human nutrition. It plays an important role in many biological processes, generally exerting its biological affect through selenoproteins. Selenium is incorporated specifically into proteins by a UGA codon that encodes for selenocysteine. There are over 30 known selenoproteins in mammalian systems, including a number of glutathionine peroxidases (GPx), iodothyronine 50-deiodinases (IDI), sperm capsule selenoprotein, and thioredoxin reductase (1, 2). Selenium also is required for the production of triiodothyronine, a thyroid hormone necessary for healthy brain and bone development, normal growth, and thermoregulation (3). Proper immune function also is selenium-dependent, which recently has prompted investigations into its ability to inhibit HIV and AIDS progression (4).

Journal: 
Spectroscopy, Feb 1, 2006 .

Analysis of Fusarium Toxins Using LC–MS-MS: Application to Various Food and Feed Matrices

Fusarium fungi are capable of producing, to a variable degree, two or more toxins. The major Fusarium mycotoxins are fumonisins, A- and B-trichothecenes, and zearalenone (ZON) (1). Trichothecenes are responsible for a wide range of toxicity in animals, including feed refusal, weight loss and vomiting. In particular deoxynivalenol (DON) can inhibit protein biosynthesis and has been reported as an immunosuppressant (2). To reduce the levels of biogenic toxins, European authorities are currently discussing further regulations on mycotoxins. Within the European Union (EU), harmonized legislation is setting maximum limits for aflatoxins and ochratoxin A in cereals and cereal products. Limits for Fusarium toxins (DON, ZEA, HT2, and T2) are currently being drafted in EU member states; for example, maximum limits for Fusarium toxins (DON 100–500 μg/kg, ZON 20–50 μg/kg) were established in February 2004 (3).

Journal: 
LCGC North America, Apr 1, 2005 .

Control of Matrix Effects in Bioanalytical MS–MS Using Online Multidimensional SolidPhase Extraction

In the pharmaceutical industry, liquid chromatography–tandem mass spectrometry (LC–MS-MS) is already an established method for quality control and quantification of drugs in different matrices. Additionally, this hyphenated analytical tool is becoming more and more important in clinical chemical analysis (that is, in therapeutic drug monitoring).

LC–MS-MS is a very powerful analytical technique because it combines the separation power of LC with the sensitivity and selectivity of MS. However, LC–MS-MS possesses two major drawbacks when analyzing drugs in biological fluids. The first, associated with the mass spectrometer, is that the electrospray source is very susceptible to matrix-related ion-suppression effects. The second drawback concerns the LC. Because of irreversible adsorption and precipitation effects caused by high molecular weight sample components (for example, proteins) complex biofluids cannot be injected and analyzed directly.

Journal: 
LCGC North America, Apr 1, 2005 .

A High Volume, High Throughput LC MS Therapeutic Drug Monitoring System

Liquid chromatography-mass spectrometry (LC–MS) has been an important analytical tool in support of drug discovery and drug development for some time. LC–MS provides a combination of detection selectivity and sensitivity, speed of analysis, and robust performance that is well suited to the rapid structural characterization of candidate therapeutic substances and high-throughput screening assessment of pharmacological activity (1-3). More recently, LC–MS has been used for patient monitoring in clinical drug trials (4-6) and for the detection of drugs of abuse (7). As knowledge has grown about the relationship between genetic and environmental factors and individual responses to drugs, clinicians have sought new ways to monitor drug responses accurately to assess and tailor drug therapies more effectively. With its advantageous performance characteristics, LC–MS has proven to be a useful tool for collecting data characterizing these relationships.

Journal: 
LCGC North America, Apr 1, 2005.

Mass Spectrometry Analysis of Liquid Chromatography Fractions using Ettan LC-MS Systems

GUIDE TO LC–MS.
Summary Mass spectrometry provides a faster of fractions. The procedure described involves initial protein purification on ÄKTA™ purifier 10, automated and rapid desalting of fractions on Ettan microLC, and MS analysis by electrospray ionization time-of-flight mass spectrometry (ESI-ToF MS) using Ettan ESI-ToF. Ettan LC–MS provides high-quality mass spectra of a wide range of high molecular weight proteins including bovine serum albumin, cytochrome C, transferrin, ovalbumin, myoglobin, a monoclonal antibody and two -lactoglobulin variants.
 

Journal: 
LCGC Europe, Dec 2, 2001.

Mass Spectrometry Forum - Masses in Mass Spectrometry: Perfluors and More

Part II of this four-part series on mass calibration looks at the chemical compounds used as mass calibrants in mass spectrometry.

Corrections belong up front. Part I of this column series included a description of mass scales and units, exhorting readers and users to pay attention to basics. An essential part of basics is good proofreading, a skill that seems to have deserted this author in preparing Part I. Table II in Part I (Spectroscopy 19[11], 32–34 [2004]) lists the exact mass for 13C incorrectly as 13.993355. I considered assigning the blame for such an egregious error to electronic voting machines (it was, after all, an election year, and an election month), or fat fingers on the keyboard, but instead I admit to sloppiness and apologize for the error. The correct value for the exact mass of 13C is 13.003355.My thanks to the readers who notified me of the error and demanded a recount.

Journal: 
Spectroscopy, Feb 1, 2005.

Considerations for Primary Vacuum Pumping in Mass Spectrometry Systems

Mass spectrometry systems have specific vacuum requirements. New developments in oil-free, or dry, primary vacuum pumps have been introduced recently and are discussed in this article with respect to capacity, throughput, and specific pumping requirements for process gases.

 There are many drivers for vacuum configuration in mass spectrometry (MS) and other scientific instrumentation applications. These include: vacuum performance of the primary pump itself (speed, compression, power, and so forth); environmental impact, power, construction, service interval, and the requirements (if any) for oil; regulatory compliance; cleanliness of the vacuum produced; and compatibility with process and target gases–vapors. MS systems have very specific vacuum (physics and engineering) requirements. The systems primarily considered here are liquid chromatography–MS (LC–MS), gas chromatography– MS (GC–MS) and inductively coupled plasma MS (ICP-MS).

Journal: 
Spectroscopy, Jan 1, 2005.

High-Throughput Peptide Mass Mapping using an Integrated Capillary Device Coupled to a Mass Spectrom

This article describes the development of a simple enzymatic reactor and its interfacing with a mass spectrometer for high-throughput mass mapping of peptides. This procedure combines preconcentration and enzymatic digestion in the nano-electrospray emitter.

The recently decoded human genome is believed to be a massive source of information that will lead to improved diagnostics of diseases, earlier detection of genetic predispositions to diseases, gene therapy, rational drug design and pharmacogenomic “custom drugs”. The upcoming “post-genomic” era will then target the gene expression network and the changes induced by effects such as disease, environment or drug treatment. In other words, knowledge of the exact composition of proteins within a living body and the changes in composition that reflect both healthy and diseased states will be used to determine the pharmacological action of potential drugs.

Journal: 
LCGC Europe, Jan 1, 2005.

Packed Column Supercritical Fluid Chromatography–Mass Spectrometry for Drug Discovery Applications

In the last five years, the acceptance and implementation of packed-column supercritical fluid chromatography–mass spectrometry (pSFC–MS) to drug discovery applications has gained momentum. This article describes the pros and cons of pSFC–MS and attempts to demonstrate its broad applicability to such fields as high-throughput analysis, purity assessment, structure characterization and purification. Finally, an outlook for the future of this technique is presented.

Journal: 
LCGC Europe, Apr 1, 2004.

IC–MS Determination of Ionic Compounds in Toothpaste

A fast and easy-to-use method for the identification and determination of active anionic ingredients in toothpaste is presented using ion chromatography in combination with electrospray mass spectrometry. The total analysis time is 22 min using a potassium hydroxide gradient to separate fluoride, carbonate, sulphate, glycerol, sorbitol, saccharin, monofluorophosphate, phosphate, pyrophosphate and tripolyphosphate in a single injection.

Introduction Caries are caused by bacteria-producing plaque on teeth. Fluoride is an active ingredient in toothpaste to reduce plaque. Today different chemical forms of fluoride are used in toothpaste. These forms include fluoride, monofluorophosphate and amine fluorides. In addition to carbonate, phosphates such as pyrophosphate and tripolyphosphate are used in toothpaste to reduce tartar. Saccharin is used as a sweetener, and sorbitol and glycerol as moisture control agents.

Journal: 
LCGC Europe, Mar 1, 2004.

Comprehensive pSFCXpSFC–MS for the Characterization of Triglycerides in Vegetable Oils

A system for automated off-line comprehensive packed column supercritical fluid chromatography (pSFCpSFC) was developed for the characterization of triglycerides (TGs) in vegetable oils. In the first dimension, TGs are separated according to their hydrophobicity using octadecyl silicagel as stationary phase. In the second dimension, separation occurs according to degree of unsaturation using a silver-loaded stationary phase. Fraction collection, concentration and re-injection are fully automated. The two orthogonal separation mechanisms give a better insight into the TG composition of vegetable oils. UV detection at 210 nm is normally applied for both columns. For unequivocal TG elucidation, a mass spectrometer (MS) operated in the atmospheric pressure chemical ionization mode may be coupled after the second UV detector. The potential of pSFCpSFC–MS is illustrated.

Introduction :

Journal: 
LCGC Europe, Dec 2, 2003.

Gas Chromatography at the 26th International Symposium on Capillary Chromatography and Electrophores

This month in “GC Connections,” John Hinshaw files a report of the 26th International Symposium on Capillary Chromatography and Electrophoresis, which was held in May.

Almost 350 scientists, researchers, students and industry representatives attended the 26th International Symposium on Capillary Chromatography and Electrophoresis — ISCCE 2003 — 18–22 May 2003 in Las Vegas, Nevada, USA. Returning to Las Vegas after two years, the symposium again was a clear success. The registration list included a wide sampling of European, American and Asian attendees, despite the last-minute cancellation of several foreign representatives from severe acute respiratory syndrome (SARS)–affected areas.

Journal: 
LCGC Europe, Oct 1, 2003.

Analysis of Acrylamide in Food by GC–MS

A positive chemical ionization GC–MS method for the analysis of acrylamide monomer in foods will be described and future areas for development offered. The method had a limit of detection of 5 ppb and was found to show good linearity to 1000 ppb. PCI SIM using ammonia as a reagent gas provided the best blend of sensitivity and selectivity.

Introduction :

Journal: 
LCGC Europe, Sep 2, 2003.

Improving LC–MS/MS Analyses in Complex Food Matrices, Part II — Mass Spectrometry

The mass spectrometric response in complex biological samples is often directly related to the influence of co-eluting compounds on the ionization efficiency of analytes. This can lead to decreased sensitivity, selectivity and accuracy of liquid chromatography–mass spectrometry (LC–MS) analyses, especially when matrix composition varies from sample to sample. By applying certain sample clean-up and/or chromatographic separation strategies LC–MS method performance can be improved. In contrast to these approaches, this article will discuss other simple and effective strategies to improve LC–MS method performance.

Journal: 
LCGC Europe, Jun 1, 2003.

Go Proteineering! Integrated proteome analysis using high-throughput MS-based Identification

Introduction :
High-throughput mass spectrometry–based protein identification requires a complete solution which includes a complete hardware setup starting from a 2D gel, and an integrated software package. The Bruker PROTEINEER™ line meets these requirements. The flow of information through the whole line enables data handling in a highly integrated level. The backbone of the PROTEINEER™ suite is the embedded Workflow Administration by Result-driven Processing (WARP™, Figure 1). The workflow for each sample is controlled across all PROTEINEER™ hardware components (robotics and mass spectrometers), and depends on the intermediate results from the mass spectrometric stages. For this task, all robots and mass spectrometers track sample IDs by electronic transponders and exchange the related processing parameters and results with the central control unit: ProteinScape™.

Journal: 
LCGC Europe, Apr 2, 2003.

LC/MS of Glyphosate and AMPS Using Hypercarb

Through its primary retention mechanisms (dispersive and charge induced interactions), Hypercarb® shows greater retention and resolution for underivatized glyphosate and AMPA than silica based C18.

The analysis of highly polar analytes on traditional RP silica-based columns (without the use of ion-pair reagents etc) is difficult as the analyte–stationary phase interactions are minimal and so little to no retention is often achieved. This application note describes the use of a porous graphitic carbon column to achieve polar analyte and degradation product retention and separation using reversedphase conditions.
 
Glyphosate (N-phosphonomethyl glycine) is a broad spectrum, non-selective herbicide that acts by inhibiting the shikimic acid pathways in plants. Glyphosate readily breaks down into aminomethyl phosphonic acid (AMPA) in the environment; hence both compounds require accurate measurement to protect drinking water supplies.

Journal: 
LCGC Europe, Apr 2, 2003.

Miniaturization in LC–MS

>Introduction :

In the April edition of this magazine1 Ron Majors, in his annual report on new columns and accessories from the Pittsburgh conference, reported how at the 2002 conference the largest number of product introductions were for biomolecule separations and for liquid chromatography–mass spectrometry (LC–MS). He went on to state that speciality HPLC columns for chiral compounds, biomolecules, combinational chemistry, carbohydrate analysis and LC–MS represented the largest category of entries. Supporting these products was an increase in capillary and nano-LC columns for LC–MS. But more important the support accessories (e.g., mixers, valves and connecting tubes) were also shown for the new capillary columns.

Journal: 
LCGC Europe, Nov 2, 2002.

LC–MS of Synthetic Polymers: The Parable of the Lame and the Blind

A synthetic polymer is not a uniquely defined chemical compound. Not all molecules are identical. In ‘simple’ homopolymers the individual molecules vary (unavoidably) in size and (possibly) in end groups (functionality).*(See footnote at end of article.) Polymeric chains may be linear, branched to variable extents or even cyclic. In addition, some important polymers, such as polypropene, polystyrene and polyacrylates exhibit variations in chain (stereo-) regularity or ‘tacticity’. In some other instances, such as PVC, head-to-head vs. head-totoe, isomerism is a significant issue. Given all these possible variations between the individual molecules, we should stop calling homopolymers ‘simple.’ Molecules of copolymers enjoy several additional degrees of freedom.

Journal: 
LCGC Europe, Nov 2, 2002.

The Role of LC–MS in Drug Discovery

Introduction :

The implementation of new tools within the discovery process, including combinatorial chemistry, proteomics and ADME/tox profiling, demand the creation of new strategies for pharmaceutical analysis. Sample generation has increased very rapidly and, as a consequence, traditional analytical approaches are unable to fulfil the requirements set by lead generation. Therefore, a great challenge has developed to create new, rapid, high-throughput analytical methods to speed-up the whole discovery process.

CE–MS

Capillary electrophoresis (CE) is a relatively new tool for chiral analysis. Chiralty is very important in biochemistry because different enantiomers can produce diverse pharmacological and toxicological actions. Fujiware and Honda described the use of CE in the pharmaceutical industry.1 Once a screening method has been developed, CE can be used as an additional technique for the detection of impurities.

Journal: 
LCGC Europe, Nov 2, 2002.

LC–MS in Proteomics and Glycoprotein Analysis

Introduction :

Hyphenation of efficient separation methods such as high performance liquid chromatography (HPLC) or capillary electrophoresis (CE) with detection methods that provide structural or functional information is a powerful tool for the analysis of biological macromolecules. In particular, characterization of complex molecules such as proteins, peptides and carbohydrates necessitates the use of combined analytical methods to assign molecular structures to the peaks occurring during chromatography or electrophoresis. The combination of HPLC and mass spectrometry (LC–MS) is particularly powerful and a mainstay method in most laboratories dealing with the analysis of biomacromolecules. Recent years have seen a shift from hypothesis-driven biological research towards the global analysis of the cell components, tissues or living organisms.

Journal: 
LCGC Europe, Nov 2, 2002.

Recent Applications of LC–MS in Forensic Science

Introduction :

The term “forensic science” covers those professions that are involved in the application of the social and physical sciences to the criminal justice system. Forensic experts are obliged to explain the smallest details of the methods used, to substantiate the choice of the applied technique and to give their unbiased conclusions. The final result of the work of the forensic scientist, the expert evidence, exerts a direct influence on the fate of a given individual. This burden is a most important stimulus and one that determines the way of thinking and acting in forensic sciences. Consequently, the methods applied in forensic laboratories should assure a very high level of reliability and must be subjected to extensive quality assurance and rigid quality control programmes.1 Legal systems are based on the belief that the legal process results in justice — a belief that has come under some question in recent years.

Journal: 
LCGC Europe, Nov 2, 2002.

Recent Applications in LC–MS: Food and Flavours

One of the most important research areas concerning food proteins and peptides is to establish a relationship between the structure and functionality of these compounds.

Introduction :

Food products are very complex mixtures that contain many nutrients of organic (lipids, carbohydrates, proteins, vitamins) and inorganic (water, minerals, oxygen) nature. In addition to natural constituents, food products may contain xenobiotic substances that can come from technological processes, agrochemical treatments or packaging materials (residues of pesticides, drugs, toxins, mutagenic compounds, migrants from packaging, metals and inorganic compounds of toxicological concern).

Journal: 
LCGC Europe, Nov 2, 2002.

Recent Applications in LC–MS: Environmental Analysis

Introduction :

LC–MS is becoming an essential tool for environmental analysis. Environmental laboratories dealing with the analysis of large numbers of samples are increasingly realizing that, notwithstanding the relatively high price of LC–MS instrumentation, the technique has a lot to offer in terms of productivity, ruggedness, ease-of-use, accuracy and precision. As an example, the analysis of N-methyl carbamates is nowadays commonly performed by LC–fluorescence detection after postcolumn reaction and derivatization. In many routine laboratories, the technical staff are not highly specialized in separation sciences and to operate the postcolumn device properly, the help of a service engineer is often required. Stateof- the-art LC–MS instrumentation is very user-friendly and the productivity for carbamate analysis is much higher.

Journal: 
LCGC Europe, Nov 2, 2002.

Analysis of Various Cyanobacterial Toxins by LC–MS

Microcystins represent an emerging class of algal toxins of concern to the drinking-water industry. Consequently, the World Health Organization, Australia and Brazil have established guidelines for the amount of microcystins permissible in drinking water, and the US has begun to evaluate the occurrence, health effects and susceptibility of water treatments from these algal toxins. This article will focus on the initial development of a liquid chromatography–mass spectrometry method to screen for many of these toxins at low ppb levels.

Introduction :

Most of the world’s population relies on surface freshwaters as their primary source for drinking water. The drinking-water industry is constantly challenged with surface water contaminants that must be removed to protect public health. Contaminants associated with cyanobacteria (blue-green algae) are called cyanotoxins.

Journal: 
LC•GC Europe November 2002.

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